stp2y

arXiv:2407.08940v1 Announce Type: new Abstract: The rapid growth of biomedical knowledge has outpaced our ability to efficiently extract insights and generate novel hypotheses. Large language models (LLMs) have emerged as a promising tool to revolutionize knowledge interaction and potentially accelerate biomedical discovery. In this paper, we present a comprehensive evaluation of LLMs as biomedical hypothesis generators. We construct a dataset of background-hypothesis pairs from biomedical literature, carefully partitioned into training, seen, and unseen test sets based on publication date to mitigate data contamination. Using this dataset, we assess the hypothesis generation capabilities of top-tier instructed models in zero-shot, few-shot, and…

arXiv:2407.08888v1 Announce Type: new Abstract: Recent threat reports highlight that email remains the top vector for delivering malware to endpoints. Despite these statistics, detecting malicious email attachments and URLs often neglects semantic cues linguistic features and contextual clues. Our study employs BERTopic unsupervised topic modeling to identify common semantics and themes embedded in email to deliver malicious attachments and call-to-action URLs. We preprocess emails by extracting and sanitizing content and employ multilingual embedding models like BGE-M3 for dense representations, which clustering algorithms(HDBSCAN and OPTICS) use to group emails by semantic similarity. Phi3-Mini-4K-Instruct facilitates semantic and hLDA aid in thematic analysis…

arXiv:2407.08883v1 Announce Type: new Abstract: The relationship between brain connections and non-imaging phenotypes is increasingly studied using deep neural networks. However, the local and global properties of the brain's white matter networks are often overlooked in convolutional network design. We introduce TractGraphFormer, a hybrid Graph CNN-Transformer deep learning framework tailored for diffusion MRI tractography. This model leverages local anatomical characteristics and global feature dependencies of white matter structures. The Graph CNN module captures white matter geometry and grey matter connectivity to aggregate local features from anatomically similar white matter connections, while the Transformer module uses self-attention to enhance global information…